Home » Alumni

Alumni

 



David Lab Alumni

Past Member name, Degree, Affiliation / Year Graduated or Departed;

Dissertation / Thesis Title

UC Davis


Alan Raetz, Ph.D., Biochemistry & Molecular Biology: Postdoctoral Researcher / 2019, Graduate Student / 2013

Ph.D. Dissertation: The Role of MUTYH in Oxidative DNA Damage Repair and Alkylative DNA Damage Response in Mammalian Cells


Doug Banda, Ph.D., Chemistry: Graduate Student / 2018

A Balancing Act: DNA Glycosylases & the DNA Damage Response to Alkylating Agents


Brittany Anderson-Steele, Ph.D., Chemistry: Graduate Student / 2018

Novel Substrates Are Differentially Processed by the Two Isoforms of the Base Excision Repair Glycosylase NEIL1


Nicole N. Nuñez, Ph.D., Chemistry: Graduate Student / 2018

The Base Excision Repair Glycosylase MUTYH Relies on Two Metallocofactors to Mitigate DNA Damage


Kori Lay, M.S., Chemistry: Graduate Student / 2018

Use of a Fluorescent RNA-Based Biosensor to Evaluate Methylthioadenosine Nucelosidase Inhibition by Transition State Analogs


Amelia Manlove, Ph.D., Chemistry: Graduate Student / 2017

Structure-Activity Relationships Reveal the Hidden Substrate Recognition Requirements of MutY Adenine DNA Glycosylase


Michael Burnside, M.S., Chemistry: Graduate Student / 2017

Use of Alternative Nucleophiles in the Base Excision Repair Mechanism


Phil Yuen, Ph.D., Chemistry: Graduate Student / 2016

The Development of Pyrrolidine Transition State Analogs as Chemical Probes for DNA Glycosylases


JohnPatrick Rogers, Ph.D., Chemistry: Graduate Student / 2016

Creating a Chemical Toolbox: The Chemical Synthesis of Modified Nucleotides as Probes of DNA Repair Glycosylases


Ryan Woods, Ph.D., Chemistry: Graduate Student / 2014

Investigation of the MutY Glycosylase Mechanism


Jongchan Yeo, Ph.D., Chemistry: Graduate Student / 2014

RNA Editing Changes the Lesion Specificity for the DNA Repair Enzyme hNEIL1


Paige McKibbin, Ph.D., Chemistry: Graduate Student / 2012

Base Excision Repair (BER) and Nucleotide Excision Repair (NER) of Both Natural and Synthetic Nucleotides


Megan Brinkmeyer, Ph.D., Chemistry: Graduate Student / 2012

Mismatch Recognition and Base Excision Repair of Natural and Unnatural Amino Acid Variations of the Adenine DNA Glycosylases, MutY and MUTYH


Lisa Engstrom, Ph.D., Chemistry: Graduate Student / 2011

Characterization of the Functional Significance of metal cofactors in DNA repair enzymes


Chen Gu, M.S., Chemistry: Graduate Student / 2011

Application of Surface Entropy Reduction Technique to the DNA Glycosylase MutY


University of Utah


Sheng Cao, Ph.D., Chemistry: Graduate Student / 2010

Synthesis of Fluorinated Analogs of Oxidative DNA Lesions and their Use to Probe Features of Recognition and Repair by Base Excision Repair Glycosylases


Aaron Fleming, Ph.D., Chemistry: Graduate Student / 2009

Reactivity of 8-Oxoguanosine


Valerie O’Shea, Ph.D., Chemistry: Graduate Student / 2009

The Use of Synthetic DNA Analogs for Investigating the Structure, Mechanism, and in vivo Repair of Mismatched DNA by MutY Adenine Glycosylase


Sucharita Kundu, Ph.D., Chemistry: Graduate Student / 2009

MUTYH-Mediated Repair of Oxidative DNA Damage: Functional Characterization and Investigation into Post-Translational Modifications of MUTYH and Variants Implicated in Colon Cancer


Nirmala Krishnamurthy, Ph.D., Chemistry: Graduate Student / 2008

Insight into the Role of Base Excision Repair in the Mutagenic Profile of Oxidized Guanines: Kinetics, Binding assays and in vivo Mutagenesis Experiments.


Jody Richards, M.S., Chemistry: Graduate Student / 2008

Recognition and Repair of DNA Damage by Bacterial Adenine Glycosylases


Alison Livingston, Ph.D., Chemistry: Graduate Student / 2006

Repair of DNA Damage by MYH and Variants Associated with Colorectal Cancer


Aym Berges, Ph.D., Chemistry: Graduate Student / 2006

In Vitro Polymerase Activity of Oxidized DNA Lesions with Wild-Type HIV-1 Reverse Transcriptase and Various Drug-Resistant Mutants


Olga Lukianova, Ph.D., Chemistry: Graduate Student / 2005

Repair of Damaged DNA by Iron-sulfur cluster-containing DNA Glycosylases


Mary Pope, Ph.D., Chemistry: Graduate Student / 2004

Repair of Mismatched DNA by Bacterial and Mammalian Adenine DNA Glycosylases


Anthony Francis, Ph.D., Chemistry: Graduate Student / 2003

Recognition and Catalysis of the DNA Repair Enzyme MutY


Michael Leipold, Ph.D., Chemistry: Graduate Student / 2003

The Recognition and Repair of Oxidized Guanine Species by Bacterial and Eukaryotic OG Glycosylases


Olga Kornyushyna, Ph.D., Chemistry: Graduate Student / 2002

In Vitro Polymerase Activity of Oxidized Guanosine Lesions Spiroiminodihydantoin and Guanidinohydantoin


Nikolas Chmiel, Ph.D., Chemistry: Graduate Student / 2002

Mutations Affecting the Structure and Catalytic Activity of the DNA Repair Enzyme MutY


Wenchen Luo, Ph.D., Chemistry: Graduate Student / 2001

Characterization of Purine Oxidation Products from One-Electron Oxidants, Superoxide and Singlet Oxygen


Marie-Pierre Golinelli-Cohen: Faculty Intern / 2001


Scott Williams, Ph.D., Chemistry: Graduate Student / 2000

Active Site Chemistry of the E. coli DNA Repair Adenine Glycosylase MutY


Cindy Chepanoske, Ph.D., Chemistry: Graduate Student / 2000

Substrate Recognition by the E. coli DNA Repair Enzyme MutY


Robyn Hickerson, Ph.D., Chemistry: Graduate Student / 2000

Transition Metal-Mediated Oxidation of Nucleic Acids: Applications to Structural Probing, 8-OxoG Detection, and Protein-DNA Cross-Linking


Daren Heaton, Ph.D., Biochemistry: Graduate Student / 2000

Biophysical Characterization of COX-17, the Metallochaperone to the Mitochondria


Michael Langer, M.S., Chemistry: Graduate Student / 1999

Evidence for a Critical Role of the Iron-Sulfur Cluster Loop Domain of E. coli MutY in DNA Damage Recognition and DNA Repair


Silvia Porello, Ph.D., Chemistry: Graduate Student / 1999

DNA Repair Enzyme MutY: Substrate Recognition Properties and Kinetics of Adenine Glycosylase Activity


Amber Podoll, M.S., Chemistry: Graduate Student / 1998

Investigation into the Unusual Structural Properties of the Repetitive Centromeric Sequences of Humans and Yeast



Keywords: #davidlabalumni #davidlab #ucdavis #ucdavischemistry #dna #dnarepair #ucdavisgraduate #ucdavisgraduatestudies #sheiladavid #alumni #science #chemistry #chemicalbiology #muty #mutyh #glycosylase #organicchemistry #scientist #research #researchscientist #nucleosidechemistry #nucleosidechemist #phd

 

 

RSS Science Daily News

  • Tanks of the Triassic: New crocodile ancestor identified March 18, 2024
    Dinosaurs get all the glory. But aetosaurs, a heavily armored cousin of modern crocodiles, ruled the world before dinosaurs did. These tanks of the Triassic came in a variety of shapes and sizes before going extinct around 200 million years ago. Today, their fossils are found on every continent except Antarctica and Australia.
  • Backyard insect inspires invisibility devices, next gen tech March 18, 2024
    Leafhoppers, a common backyard insect, secrete and coat themselves in tiny mysterious particles that could provide both the inspiration and the instructions for next-generation technology, according to a new study. In a first, the team precisely replicated the complex geometry of these particles, called brochosomes, and elucidated a better understanding of how they absorb both […]
  • Two artificial intelligences talk to each other March 18, 2024
    Performing a new task based solely on verbal or written instructions, and then describing it to others so that they can reproduce it, is a cornerstone of human communication that still resists artificial intelligence (AI). A team has succeeded in modelling an artificial neural network capable of this cognitive prowess. After learning and performing a […]
  • Holographic message encoded in simple plastic March 18, 2024
    Important data can be stored and concealed quite easily in ordinary plastic using 3D printers and terahertz radiation, scientists show. Holography can be done quite easily: A 3D printer can be used to produce a panel from normal plastic in which a QR code can be stored, for example. The message is read using terahertz […]
  • Breathe, don't vent: Turning down the heat is key to managing anger March 18, 2024
    Venting about a source of anger might feel good in the moment, but it's not effective at reducing the rage, new research suggests. Instead, techniques often used to address stress -- deep breathing, mindfulness, meditation, yoga or even counting to 10 -- have been shown to be more effective at decreasing anger and aggression.

Contact:

Dr. Sheila S. David
ssdavid@ucdavis.edu
(530)-752-4280

Department of Chemistry
One Shields Ave.
Davis, CA 95616