Home » Melody Malek

Melody Malek

Melody Malek

Education:

B.S. Biological Sciences, University of California, Irvine, 2019

From: Milpitas, California

Joined David Lab: January 2021

Outside of lab: I enjoy reading, watching tv, and cooking

Research in David Lab:

DNA is prone to oxidative damage by both exogenous and endogenous sources. DNA damage must be repaired to maintain genomic integrity, and the base excision repair (BER) pathway has evolved to recognize and initiate repair caused by oxidative damage. My projects involve the glycosylases hOGG1 and NEIL 1, 2, and 3. My work with hOGG1 involves synthetic organic chemistry to synthesize potent and specific nucleic acid based inhibitors of the enzyme. It has been previously demonstrated by our lab that certain transition state analogue mimics tightly bind hOGG1’s active site, but it has yet to be demonstrated that these analogues can inhibit the enzyme in a cellular context, which is what my work focuses on. My second project (involving NEILs 1, 2, and 3) involves understanding whether repair of oxidative damage by the NEILs is affected by oxidants such as hydrogen peroxide and potassium bromate in a cellular context.

Previous Research Experience:

As an undergrad, I worked in Dr. James Nowick’s lab for 2.5 years. My first project involved synthesizing fluorescent mimics of the amyloid beta peptide, the aggregation of which has been linked to the incidence of Alzheimer’s disease. My second project involved synthesizing fluorescent mimics of the peptidic antibiotic teixobactin, which shows no detectable resistance. This work led to a publication that details the mechanism by which teixobactin is able to localize to the lipid bilayer of gram-positive bacteria.

RSS Science Daily News

  • New microscope can image, at once, the full 3D orientation and position of molecules in cells February 21, 2025
    A hybrid microscope allows scientists to simultaneously image the full 3D orientation and position of an ensemble of molecules, such as labeled proteins inside cells. The microscope combines polarized fluorescence technology, a valuable tool for measuring the orientation of molecules, with a dual-view light sheet microscope (diSPIM), which excels at imaging along the depth (axial) […]
  • How to get a robot collective to act like a smart material February 21, 2025
    Researchers are blurring the lines between robotics and materials, with a proof-of-concept material-like collective of robots with behaviors inspired by biology.
  • The brain perceives unexpected pain more strongly February 21, 2025
    Researchers used visual threat manipulation in the virtual reality environment and thermal stimulation to investigate how the brain perceives pain. They found that the brain perceives pain more strongly when the perceived pain is out of alignment with reality. In particular, pain was amplified when unexpected events occurred.
  • Brain-wide activity change visualized as geometric patterns February 21, 2025
    Researchers have applied a visualization technique to depict the brain's activity related to visual perception as geometric patterns. They visualized different shapes as the ever-changing neuronal activity in the temporal and frontal lobes of the brain during object recognition and recalling memories. This achievement promises further extraction of brain activity observed in various aspects of […]
  • Viking skulls reveal severe morbidity February 21, 2025
    Sweden's Viking Age population appears to have suffered from severe oral and maxillofacial disease, sinus and ear infections, osteoarthritis, and much more. This is shown in a study in which Viking skulls were examined using modern X-ray techniques.

Contact:

Dr. Sheila S. David
ssdavid@ucdavis.edu
(530)-752-4280

Department of Chemistry
One Shields Ave.
Davis, CA 95616